rdkit.Chem.AtomPairs package — The RDKit 2025.09.6 documentation

# rdkit.Chem.AtomPairs package

## Submodules

- rdkit.Chem.AtomPairs.Pairs module
  - `ExplainPairScore()`
  - `GetAtomPairFingerprintAsBitVect()`
  - `pyScorePair()`
- rdkit.Chem.AtomPairs.Sheridan module
  - `AssignPattyTypes()`
  - `GetBPFingerprint()`
  - `GetBTFingerprint()`
- rdkit.Chem.AtomPairs.Torsions module
  - `ExplainPathScore()`
  - `GetTopologicalTorsionFingerprintAsIds()`
  - `pyScorePath()`
- rdkit.Chem.AtomPairs.Utils module
  - `BitsInCommon()`
  - `CosineSimilarity()`
  - `DiceSimilarity()`
  - `Dot()`
  - `ExplainAtomCode()`

## Module contents